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Ok, of those, only A34L4JED8UAIXC also ran T2. With that participant, Inquisit was for some reason unable to reach the server to verify the license. In that case, a message appears indicating the failure and giving the participant the option of running anyway even though data wouldn't be saved, which they seem to have done, since they did eventually arrive at the finish page. That would explain how they could have run the whole test without producing a data file.
I've identified 2 other cases where the license check similarly failed, although I can't map them back to the mturk IDs, unless you happen to know their subject id or ip address (not sure how you would). There may be other cases that I can't identify because they didn't reach the finish page.
I'm still investigating why the license check failed to reach the server. In the meantime, you could try setting the version back to 4.0.6 for this script, although that's just a shot in the dark, as I'm not aware of any recent changes to the code that could explain this.
P.S. As for the finish page timestamps missing from the logs, that appears to be a bug in the report. The hits are there in the underlying data tables.
-Sean
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